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Focus
Single Focus
A single focus is similar to sliding a window across the genome. Only the region in this window can be analyzed.
![](/icons/foci_single.png)
91 tools
3D Genome Browser
![](/assets/3D_Genome_Browser.jpg)
3dViewer
![](/assets/3dviewer.png)
AliView
![](/assets/aliview.png)
Alvis
![](/assets/alvis.png)
Apollo
![](/assets/apollo.png)
BactoGenie
![](/assets/bactogenie.jpg)
BedSect
![](/assets/bedsect.png)
CEpBrowser
![](/assets/cepbrowser.png)
CGView
![](/assets/CGView.png)
CGView Server
![](/assets/cgview_server.png)
Cinteny
![](/assets/Cinteny.png)
Circos
![](/assets/Circos.png)
Civi
![](/assets/Civi.png)
ClicO Free Service
![](/assets/clico.png)
CNVkit
![](/assets/CNV.png)
Combo
![](/assets/Combo.png)
CRISPResso2
![](/assets/crispresso2.png)
Dalliance
![](/assets/dalliance.png)
Deep Motif Dashboard
![](/assets/deepmotifdashboard.png)
deepTools Heatmap
![](/assets/deeptools.png)
DNAPlotter
![](/assets/DNAPlotter.png)
EaSeq
![](/assets/easeq.png)
Edgar Genome Browser
![](/assets/edgargenomebrowser.png)
Edgar Synteny Plots
![](/assets/edgarsyntenymatrix.png)
EnrichedHeatmap
![](/assets/enrichedheatmaps.png)
Ensembl
![](/assets/ensembl.png)
EpiViz
![](/assets/epiviz.png)
Galaxy HiCExplorer
![](/assets/hicexplorer.png)
GBrowse
![](/assets/GBrowse.png)
Genome Annotator Light (GAL)
![](/assets/GAL.png)
GenomeRing
![](/assets/genomering.png)
GenomeView
![](/assets/genomeview.jpeg)
genoPlotR
![](/assets/genoplotr.png)
GenPlay
![](/assets/genplay.png)
Gepard
![](/assets/gepard.png)
ggBio
![](/assets/ggBio.png)
GIVE
![](/assets/give.png)
Gremlin
![](/assets/Gremlin.png)
GView
![](/assets/gview.png)
HilbertCurve
![](/assets/HC.png)
HilbertVis
![](/assets/HilbertVis.png)
HUGIn
![](/assets/hugin.png)
IGB
![](/assets/IGB.png)
IRScope
![](/assets/irscope.jpg)
J-Circos
![](/assets/jcircos.png)
JalView
![](/assets/jalview.png)
JBrowse
![](/assets/jbrowse.png)
JuiceBox
![](/assets/juicebox.png)
Juiceboxjs
![](/assets/juiceboxjs.png)
Lollipop Plot cBio
![](/assets/Lollipop.png)
MAGI
![](/assets/magi.png)
MEME
![](/assets/meme.png)
MEXPRESS
![](/assets/mexpress.png)
MGcV
![](/assets/mgcv.jpg)
MicroScope
![](/assets/microscope.png)
MizBee
![](/assets/Mizbee.jpg)
MochiView
![](/assets/MochiView.png)
MSAViewer
![](/assets/msaviewer.png)
my5c
![](/assets/my5c.png)
NCBI Genome Viewer
![](/assets/NCBIGenomeBrowser.png)
Oviz-Bio
![](/assets/ovizbio.png)
pLogo
![](/assets/plogo.png)
PSU 3D Genome Browser
![](/assets/3Dgenomebrowser.jpg)
ReadXplorer
![](/assets/readxplorer.png)
RIdeogram
![](/assets/rideogram.png)
Rondo
![](/assets/Rondo.png)
Sashimi Plot
![](/assets/Sashimi.png)
Savant Genome Browser 2
![](/assets/savant.png)
SCGV
![](/assets/scgv.png)
Sequence Bundles
![](/assets/sequencebundles.png)
Sequence Surveyor
![](/assets/sequencesurveryor.png)
Spatial DB
![](/assets/spatialdb.png)
SpliceGrapher
![](/assets/splicegrapher.png)
SplicePlot
![](/assets/spliceplot.png)
SpliceSeq
![](/assets/spliceseq.png)
svist4get
![](/assets/svist4get.png)
SWAV
![](/assets/swav.png)
SynMap2
![](/assets/synmap2.png)
SynteBase and SynteView
![](/assets/syntebaseview.png)
Synteny Explorer
![](/assets/syntenyexplorer.png)
TFmotifView
![](/assets/tfmotifview.png)
Two Sample Logo
![](/assets/two.png)
UCSC Genome Browser
![](/assets/UCSC_Genome_Viewer.png)
Variant View
![](/assets/variantview.png)
VCF Plotein
![](/assets/vcfplotein.png)
Vials
![](/assets/vials.png)
Vista Dot
![](/assets/vistadot.png)
Vista Synteny
![](/assets/vistasynteny.png)
VistaPoint
![](/assets/vistapoint.png)
WashU Epigenome Browser
![](/assets/washu.png)
WebLogo
![](/assets/Weblogo.png)
Multiple Foci
Multiple foci enable users to look at distinct segments of a genome in parallel and compare features that are dispersed across the genome.
![](/icons/foci_multiple.png)
15 tools